WebChimeric alignment An alignment of a read that cannot be represented as a linear alignment. A chimeric alignment is represented as a set of linear alignments that do not … WebLibraries were subjected to paired-end deep sequencing, and species-specific sequence reads were identified by comparing genomic alignments. Sequence mate-pairs in which …

Group - Group reads based on their UMI and mapping coordinates

WebShown below is a quantitation of all partner reads where the first end aligned to chromosome 1 (red = high number of partner reads, blue = low number of partner reads). This showed that the majority of Read 2 … WebOct 6, 2015 · 131.4 Gb pair-end (PE) sequence data was reanalyzed for the chimeras. Totally, 40,259,438 read pairs (6.19%) with chimerism were discovered among 650,430,811 read pairs. The chimeric sequences are consisted of two or more parts which locate inconsecutively but adjacently on the chromosome. inclusion\\u0027s fq

PREPRINT - arXiv

WebSep 2, 2024 · The method, called PROPER-seq (protein-protein interaction sequencing), tags proteins with RNA barcodes that form chimeric sequences when brought into proximity with each other. "PROPER-seq scans approximately 15,000 times 15,000 protein pairs," said Sheng Zhong, a professor at the University of California, San Diego whose lab … WebNational Center for Biotechnology Information WebShown below is a quantitation of all partner reads where the first end aligned to chromosome 1 (red = high number of partner reads, blue = low number of partner reads). This showed that the majority of Read 2 … inclusion\\u0027s fl